This function is an alias for BulkPhyloExpressionSet_from_df.
Please refer to the documentation for BulkPhyloExpressionSet_from_df for usage details, arguments, and examples.
Usage
as_BulkPhyloExpressionSet(
data,
groups = colnames(data[, 3:ncol(data)]),
name = deparse(substitute(data)),
strata_legend = NULL,
...
)Arguments
- data
A data frame with phylostratum assignments and gene expression data
- groups
Vector of group labels for the samples/replicates
- name
Character string to name the dataset
- strata_legend
Optional data frame mapping phylostratum numbers to labels
- ...
Additional arguments passed to BulkPhyloExpressionSet_from_df