pStrata(ExpressionSet)
ExpressionSet | a standard PhyloExpressionSet or DivergenceExpressionSet object. |
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Hajk-Georg Drost
data(PhyloExpressionSetExample) # compute partial TAI values for each Phylostratum partialStrata <- pStrata(PhyloExpressionSetExample) # show that colSums of pStrata is equavalent to the TAI values all.equal(colSums(partialStrata),TAI(PhyloExpressionSetExample)) #> [1] TRUE # show that colSums of pStrata is equavalent to colSums of pMatrix(PhyloExpressionSetExample) all.equal(colSums(partialStrata),colSums(pMatrix(PhyloExpressionSetExample))) #> [1] TRUE