Create MutationParams object

Source: R/params.R

Create MutationParams object

MutationParams(model = "K80")

Arguments

model

Which point mutation/substitution model will be used to modify the sequences during the simulation? Options are "JC69" (Jules and Cantor 1969), "K80" (Kimura 1980), "F81" (Felsenstein 1981), "HKY85" (Hasegawa, Kishino and Yano, 1985), "TN93" (Timura and Nei 1993), or "GTR" (General Time Reversible Model, Tavaré 1986), note however that "GTR" is currently unsupported.

Value

A bundling of the parameters given to it as a MutationParams object

Examples

mutationParams <- MutationParams(model = 'F81')