Function reference • rdiamond

All functions
`diamond_protein_against_ncbi_nr()`	Perform Protein to Protein DIAMOND2 Searches (BLASTP) against the NCBI non-redundant (NR) database
`diamond_protein_to_protein()`	Perform Protein to Protein DIAMOND2 Searches (BLASTP)
`diamond_protein_to_protein_best_hits()`	Perform a DIAMOND2 Protein to Protein best hit search
`diamond_protein_to_protein_best_reciprocal_hits()`	Perform a DIAMOND2 Protein to Protein best reciprocal hit search
`file_contains_aa()`	Helper function to check whether input file contains amino acids as required
`file_contains_dna()`	Helper function to check whether input file contains dna as required
`filter_best_hits()`	Helper function to select best DIAMOND hit based on minimum evalue
`list_outformats()`	List available BLAST output formats
`read_diamond()`	Import DIAMOND2 output file

Reference