List available BLAST output formats

Source: R/list_outformats.R

Available BLAST output formats are listed as they can be specified as out.format argument in any blast_* function.

list_outformats()

Author

Hajk-Georg Drost

Examples

# list available BLAST output formats
list_outformats()
#>  [1] "pair"              "qa.ident"          "qa.nonident"      
#>  [4] "fq.ident"          "fq.nonident"       "xml"              
#>  [7] "tab"               "tab.comment"       "ASN.1.text"       
#> [10] "ASN.1.binary"      "csv"               "ASN.1"            
#> [13] "json.seq.aln"      "json.blast.multi"  "xml2.blast.multi" 
#> [16] "json.blast.single" "xml2.blast.single" "SAM"              
#> [19] "report"