Available BLAST output formats are listed as they can be specified as out.format argument in any blast_* function.

list_outformats()

Examples

# list available BLAST output formats list_outformats()
#> [1] "pair" "qa.ident" "qa.nonident" #> [4] "fq.ident" "fq.nonident" "xml" #> [7] "tab" "tab.comment" "ASN.1.text" #> [10] "ASN.1.binary" "csv" "ASN.1" #> [13] "json.seq.aln" "json.blast.multi" "xml2.blast.multi" #> [16] "json.blast.single" "xml2.blast.single" "SAM" #> [19] "report"