
Force a numeric matrix generated with make_adjacency into the edgynode standard matrix format
make_standard.RdThis function takes an adjacency matrix as input and converts it into a standard form (based on the options provided).
Usage
make_standard(
adj,
max_value = 1,
split_by_margin = NULL,
no_negative = TRUE,
no_self_loops = TRUE
)Arguments
- adj
an adjacency matrix converted from a raw input matrix via
make_adjacency.- max_value
the maximum (positive) value that should exist in the matrix; default is 1; setting this to
NULLormax(abs(adj))leaves the values unchanged- no_negative
whether there should be negative values or just their absolute value (e.g. in the case of correlations); default is
no_negative = TRUE.- no_self_loops
whether the values in the main diagonal of the adjacency matrix should be 0; default is
no_negative = TRUE.