Import sequences of predicted LTR transposons

Import sequences of predicted LTR transposons generated by LTRharvest, LTRdigest, or LTRpred.

read.seqs(seq.file, program = "LTRharvest")

Arguments

seq.file	path to fasta file storing the sequences of predicted LTR transposons generated by `LTRharvest`, `LTRdigest`, or `LTRpred`.
program	program used to generate the LTR transposons specified in `seq.file`, e.g. `program = "LTRpred"`, `program = "LTRdigest"`, or `program = "LTRharvest"`.

Hajk-Georg Drost