Export sequences of TEs belonging to the same cluster

Export sequences of TEs belonging to the same cluster to separate fasta files. Each cluster will be stored in an individual fasta file.

clust2fasta(LTRpred.tbl, seqs)

Arguments

LTRpred.tbl	data.frame generated by LTRpred.
seqs	path to the fasta file storing the TE sequences.

See also

LTRpred, cluster.members

Author

Hajk-Georg Drost